Publications

Theodoridis, G, Gika, H, Raftery, D, Goodacre, R, Plumb, R.S, Wilson, I.D. Ensuring Fact-Based Metabolite Identification in Liquid Chromatography-Mass Spectrometry-Based Metabolomics. Anal. Chem. 2023 95(8) 3909-3916. doi: 10.1021/acs.analchem.2c05192. PMID: 36791228

Nagana Gowda, G A , Raftery, D. NMR Metabolomics Methods for Investigating Disease. Anal Chem. 95(1):83-99 (2023). PMID: 36625102

Nagana Gowda, G A, Pascua V, Raftery, D. A new limit for blood metabolite analysis using 1H NMR spectroscopy. J. Magn. Reson. Open, 12-13, 100082, (2022). PMID: 36530463 PMCID: PMC9757760

Nagana Gowda, G A, Raftery, D. Quantitative NMR Methods in Metabolomics. Handbook Exp. Pharmacol. 277L 143-164 (2023). doi: 10.1007/164_2022_612. PMID: 36308549

He Y, Peng, L, Zhang, D, Zhao, Z. Risk Analysis via Generalized Pareto Distributions. J. Business & Economic Statistics 40: 852-867 (2022). Doi: 10.1080/07350015.2021.1874390.

Liu D, Yang Z, Chandler K, Oshodi A, Zhang T, Ma J, Kusumanchi P, Huda N, Heathers L, Perez K, Tyler K, Ross RA, Jiang Y, Zhang D, Zhang M, Liangpunsakul S. Serum metabolomic analysis reveals several novel metabolites in association with excessive alcohol use – an exploratory study. Translational Research, 240: 87-98, 2022. PMID: 34743014. PMCID: PMC9506418.

Chen C, Gowda N, Zhu J, Deng L, Gu H, Chiorean G, Zaid M, Harrison M, Zhang D, Zhang M*, and Daniel Raftery*. (2017). Altered metabolite levels and correlations in patients with colorectal cancer and polyps detected using seemingly unrelated regression analysis. Metabolomics. 13:125. DOI 10.1007/s11306-017-1265-0.
Chen C, Deng L, Wei S, Gowda N, Gu H, Chiorean EG, Zaid MA, Harrison ML, Pekny JF, Loehrer PJ, Zhang D, Zhang M*, and Raftery D*. (co-corresponding authors, 2015) Exploring metabolic profile differences between colorectal polyp patients and controls using seemingly unrelated regression. Journal of Proteome Research. 14(6): 2492-2499.
Nagana Gowda, G A, Gowda, Y N, Raftery, D. Expanding the Limits of Human Blood Metabolite Quantitation using NMR Spectroscopy. Analytical Chemistry, 87:706-715, 2015.
Nagana Gowda, G A, Raftery, D. Can NMR Solve Some Significant Challenges in Metabolomics? Journal of Magnetic Resonance. 260: 144-160, 2015.
Zhu, J, Djukovic, D, Deng, L, Gu, H, Himmati, F, Chiorean, E G, Raftery, D. Colorectal Cancer Detection using Targeted Serum Metabolic Profiling. Journal of Proteome Research. 13:4120-4130, 2014.
Zheng C, Zhang S, Ragg S, Raftery D, Vitek O. Identification and quantification of metabolites in 1H NMR spectra by Bayesian model selection. Bioinformatics. 2011 Mar 12;27(12):1637-44.
Gu H, Pan Z, Xi B, Asiago V, Musselman B, Raftery D. Principal component directed partial least squares analysis for combining nuclear magnetic resonance and mass spectrometry data in metabolomics: application to the detection of breast cancer. Analytica chimica acta. 2011 Feb 7;686(1):57-63.
Zhang D, Huang X, Regnier F, and Zhang M. (2008). Two-dimensional correlation optimized warping algorithm for aligning GCxGC-MS data. Analytical Chemistry, 80(8): 2664-2671.